Protein ZmMADS40
ZmMADS40 is a protein in the MADS family.
Information
TF Name: ZmMADS40
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS40
Uniprot ID: K7U8R2
Subgenome: 1

Protein ZmMADS40

ZmMADS40 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319
Zm00001eb165510_T003
Zm00001eb165510_T001
Zm00001eb165510_T002
Zm00001eb165510_T004
Zm00001eb165510_T005

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048697DAPseq no logo sequence fimo position
Zm00001d048697DAPseq no logo sequence fimo position
Zm00001d048697ChIPseq no logo sequence fimo position
Zm00001d048697PChIPseq no logo sequence fimo position

Interactions where ZmMADS40 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS40 is the target  
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There are 69 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb165510_T003 from maize genome v5

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHL
PSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQ
QPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHL
PSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQ
QPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHL
PSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQ
QPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHL
PSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQ
QPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHL
PSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQ
QPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
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Nucleotide Sequence
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CACAGACAATGCACACATAATCCGC...

GRMZM2G441115_T01 from maize genome v3


Related TFome: pUT4239

Amino Acid Sequence
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MGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSILCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERA
KRVQTVEGNFGKQHLIGLQYAATQFQTDMQLPLGLPGESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFST
VKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQ
YDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQVSA

Nucleotide Sequence
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ATGGGGAGGGTGAAGCTGAAGATCA...

Zm00001d048697_T001 from maize genome v4

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP
GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSL
HLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQH
HQQPQSSPAQQQL

Nucleotide Sequence
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ACCGTCTGCGCGCCGGCCGGCGGTC...

Zm00001d048697_T002 from maize genome v4

Amino Acid Sequence
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MEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLPGESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIA
QGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGV
ASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQLPAATTLATASFDHAVYHSSSQHQQ
VMIG

Nucleotide Sequence
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GGCTCTAAAGAAGACTTTCAAGAAA...

Zm00001d048697_T003 from maize genome v4

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEVIYLNRQIFRHGFSLDTNLNCCAQKGSKE
DFQETRPRCKYSRLSRLAGSDSRGAISRACLVAGSGGGASKACQCRCDFPFMTHDPVKCSPRCESMALISLDWSDPEKVD
NIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLPGESGPSSWFQNGGADGQQAMMLTDESGL
LHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSLHLPSQQFPYPPFDHHGLYSDRIFRPDAV
ELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQLPAATTLATASFDHAVYH
SSSQHQQVMIG

Nucleotide Sequence
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ACCGTCTGCGCGCCGGCCGGCGGTC...

Zm00001d048697_T004 from maize genome v4

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP
GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSL
HLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQH
HQQPQSSPAQLPAATTLATASFDHAVYHSSSQHQQVMIG

Nucleotide Sequence
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GTCTGCGCGCCGGCCGGCGGTCCGC...

Zm00001d048697_T005 from maize genome v4

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP
GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSL
HLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQH
HQQPQSSPAQQQL

Nucleotide Sequence
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ACCGTCTGCGCGCCGGCCGGCGGTC...

Zm00001eb165510_T001 from maize genome v5

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQFPYPPFDHHGLYSDRIFRPDAV
ELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQLPAATTLATASFDHAVYH
SSSQHQQVMIG

Nucleotide Sequence
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CACAGACAATGCACACATAATCCGC...

Zm00001eb165510_T002 from maize genome v5

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQTDMQLPLGLPGE
SGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQQFPYPPFDHHGLYSDRIFRPDA
VELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQLPAATTLATASFDHAVY
HSSSQHQQVMIG

Nucleotide Sequence
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CACAGACAATGCACACATAATCCGC...

Zm00001eb165510_T004 from maize genome v5

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP
GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQFPYPPFDHHGLYSDRIFRPD
AVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQQQL

Nucleotide Sequence
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CACAGACAATGCACACATAATCCGC...

Zm00001eb165510_T005 from maize genome v5

Amino Acid Sequence
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MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGRQVTYSKRRSGILKKAKELSI
LCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEEL
SAELVSLQGQVAELQKRVSDWSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP
GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQVVLHHPQPPDFSQTECLTSL
HLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDFLSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQH
HQQPQSSPAQQQL

Nucleotide Sequence
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TCGACCAGCAGCTTCTTCCCCTCGT...


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